parm rhomean rhomode sesand sehess seinfo 1 0.082984 0.08149 0.024724 2 0.023138 0.026018 0.02798 3 0.068748 0.072806 0.111 4 0.92579 0.93446 0.031745 5 0.18732 0.18298 0.024886 6 0.13963 0.1546 0.080273 The log posterior (log prior - objfun) at the mode is -8.7241. For EMM, if usrmod.prior returns only 0 or 1, objfun is a chi-square on ltheta - 1 - lrho degrees of freedom. See SNP parmfile for ltheta.